Basic Information
Locus ID:
gene-LOC107012693
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Prolyl 4-hydroxylase alpha subunit homologues.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 5006083 | 5012210 | + | gene-LOC107012693 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.35 | 32,410.29 Da | 39.79 | 75.54 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13640 | 2OG-Fe(II) oxygenase superfamily | 165 | 283 | 1.5E-19 | IPR044862 |
| Gene3D | G3DSA:2.60.120.620 | q2cbj1_9rhob like domain | 78 | 284 | 6.5E-80 | - |
| SMART | SM00702 | p4hc | 85 | 283 | 7.7E-66 | IPR006620 |
| ProSiteProfiles | PS51471 | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 161 | 284 | 12.189451 | IPR005123 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66060.1 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. | 0 |
| RefSeq | XP_015068088.1 | probable prolyl 4-hydroxylase 10 [Solanum pennellii] | 0 |
| F4JZ24 | Probable prolyl 4-hydroxylase 10 OS=Arabidopsis thaliana OX=3702 GN=P4H10 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology