Basic Information
Locus ID:
gene-LOC107012539
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 54921874 | 54925627 | - | gene-LOC107012539 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.48 | 73,900.65 Da | 37.74 | 97.23 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 411 | 670 | 5.0E-36 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 62 | 2.6E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 137 | 197 | 9.1E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 23 | 232 | 6.32E-41 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 384 | 670 | 8.82E-52 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 136 | 6.1E-29 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 379 | 484 | 7.0E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 140 | 249 | 2.7E-29 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 485 | 675 | 1.9E-40 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 406 | 678 | 26.85956 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G51560.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_015067895.1 | protein NSP-INTERACTING KINASE 2 [Solanum pennellii] | 0 |
| Q94F62 | BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=BAK1 PE=1 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology