Basic Information
Locus ID:
gene-LOC107012099
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
mitotic sister chromatid cohesion
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 70664311 | 70680160 | - | gene-LOC107012099 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.60 | 189,996.00 Da | 53.52 | 67.44 | -0.83 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48371 | ARM repeat | 26 | 257 | 1.82E-6 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 431 | 471 | 3.16E-6 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 425 | 477 | 3.0E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1359 | 1385 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 719 | 733 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1055 | 1127 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 287 | 351 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 569 | 584 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 869 | 900 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1161 | 1224 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 637 | 664 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 537 | 554 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1356 | 1418 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1107 | 1121 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 382 | 403 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1398 | 1412 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 777 | 803 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1451 | 1476 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 532 | 735 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 773 | 836 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1646 | 1747 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 913 | 927 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1495 | 1509 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1443 | 1622 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1548 | 1573 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 665 | 683 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 287 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1063 | 1088 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1010 | 1024 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1683 | 1747 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1255 | 1315 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1204 | 1218 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 867 | 927 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1650 | 1670 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 816 | 830 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1592 | 1606 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 967 | 1030 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1301 | 1315 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1165 | 1191 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1257 | 1288 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 971 | 997 | - | - |
| Coils | Coil | Coil | 1726 | 1746 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80810.5 | - | 0 |
| RefSeq | XP_015067320.1 | uncharacterized protein LOC107012099 isoform X2 [Solanum pennellii] | 0 |
| A8MRD9 | Sister chromatid cohesion protein PDS5 homolog D OS=Arabidopsis thaliana OX=3702 GN=PDS5D PE=2 SV=3 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology