Basic Information
Locus ID:
gene-LOC107011998
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 45217171 | 45223009 | - | gene-LOC107011998 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.67 | 79,916.63 Da | 40.76 | 90.19 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 75 | 9.4E-9 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 438 | 687 | 2.3E-23 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 103 | 161 | 1.7E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 438 | 687 | 3.32E-34 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 38 | 189 | 2.42E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 509 | 697 | 2.8E-28 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 402 | 507 | 3.4E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 195 | 9.4E-41 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 390 | 691 | 16.979895 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 335 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 335 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_015067185.1 | protein MALE DISCOVERER 2-like [Solanum pennellii] | 0 |
| C0LGU7 | Protein MALE DISCOVERER 1 OS=Arabidopsis thaliana OX=3702 GN=MDIS1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology