Basic Information
Locus ID:
gene-LOC107011883
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 56346755 | 56352170 | + | gene-LOC107011883 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.03 | 67,979.63 Da | 51.91 | 78.12 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 152 | 414 | 1.12983E-132 | - |
| Pfam | PF00069 | Protein kinase domain | 153 | 415 | 1.1E-72 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 150 | 444 | 8.77E-85 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 443 | 597 | 8.74E-17 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 146 | 242 | 3.3E-24 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 435 | 524 | 1.3E-17 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 440 | 594 | 1.3E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 243 | 434 | 4.6E-63 | - |
| SMART | SM00220 | serkin_6 | 153 | 415 | 7.5E-102 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 153 | 415 | 52.018078 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 457 | 492 | 8.264835 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 159 | 185 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 277 | 289 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 55 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 51 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_015067044.1 | CDPK-related kinase 5 [Solanum pennellii] | 0 |
| Q9SCS2 | CDPK-related kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology