Basic Information
Locus ID:
gene-LOC107011875
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 57455824 | 57460684 | + | gene-LOC107011875 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 109,128.59 Da | 33.49 | 100.16 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 66 | 1.6E-7 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 687 | 898 | 9.3E-45 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 74 | 426 | 5.96E-56 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 678 | 977 | 2.97E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 359 | 615 | 3.97E-52 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 763 | 989 | 3.3E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 311 | 626 | 7.1E-81 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 206 | 310 | 1.1E-24 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 661 | 762 | 8.7E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 205 | 9.2E-42 | IPR032675 |
| SMART | SM00220 | serkin_6 | 685 | 983 | 2.2E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 685 | 989 | 38.011284 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 808 | 820 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 691 | 719 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65710.1 | HAESA-like 2. | 0 |
| RefSeq | XP_015067035.1 | LRR receptor-like serine/threonine-protein kinase HSL2 [Solanum pennellii] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology