Basic Information
Locus ID:
gene-LOC107011799
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Di-glucose binding within endoplasmic reticulum
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 44603462 | 44639221 | - | gene-LOC107011799 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 223,182.77 Da | 36.03 | 96.12 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 666 | 933 | 5.52242E-94 | - |
| CDD | cd14066 | STKc_IRAK | 1673 | 1938 | 5.88961E-96 | - |
| Pfam | PF11721 | Malectin domain | 398 | 584 | 3.0E-40 | IPR021720 |
| Pfam | PF11721 | Malectin domain | 1407 | 1592 | 3.7E-38 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 663 | 882 | 5.1E-48 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1670 | 1936 | 1.2E-48 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 1083 | 1359 | 2.15E-47 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 72 | 350 | 5.21E-45 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 642 | 933 | 3.83E-81 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1648 | 1937 | 3.28E-81 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1052 | 1196 | 2.6E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 187 | 255 | 5.6E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 256 | 374 | 4.2E-17 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1743 | 1946 | 2.6E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1263 | 1382 | 1.2E-20 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 625 | 735 | 5.9E-38 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 48 | 186 | 1.3E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1197 | 1262 | 8.9E-14 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 1405 | 1597 | 1.4E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 736 | 943 | 5.0E-58 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 396 | 588 | 7.6E-35 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1633 | 1742 | 2.6E-37 | - |
| SMART | SM00220 | serkin_6 | 1667 | 1899 | 3.7E-33 | IPR000719 |
| SMART | SM00220 | serkin_6 | 660 | 931 | 3.0E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1667 | 1940 | 38.774521 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 660 | 931 | 38.816925 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 782 | 794 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 666 | 688 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1787 | 1799 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G29750.2 | receptor-like kinase in flowers 1. Receptor-like serine/threonine kinase (RKF1). The putative extracellular domain of the RKF1 protein contains 13 tandem repeats of leucine-rich sequences. Expressed in early flower primordial, stamen, and pollen grains. | 0 |
| RefSeq | XP_015066933.2 | uncharacterized protein LOC107011799 [Solanum pennellii] | 0 |
| Q9FXF2 | Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana OX=3702 GN=RKF1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology