Basic Information
Locus ID:
gene-LOC107011585
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 2417985 | 2423190 | + | gene-LOC107011585 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.59 | 72,889.62 Da | 42.55 | 88.84 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 333 | 604 | 1.04077E-90 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 49 | 130 | 2.2E-10 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 151 | 239 | 3.2E-10 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 330 | 540 | 1.2E-45 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 311 | 621 | 4.24E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 403 | 611 | 7.7E-58 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 31 | 132 | 7.7E-16 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 287 | 402 | 2.6E-31 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 142 | 242 | 7.9E-15 | IPR038408 |
| SMART | SM00220 | serkin_6 | 327 | 604 | 1.1E-30 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 31 | 132 | 15.891412 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 137 | 242 | 14.660326 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 327 | 603 | 37.558998 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 448 | 460 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 333 | 355 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70520.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_027769909.1 | cysteine-rich receptor-like protein kinase 2 isoform X1 [Solanum pennellii] | 0 |
| Q9CAL3 | Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRK2 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology