Basic Information
Locus ID:
gene-LOC107011470
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 46061488 | 46065529 | - | gene-LOC107011470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.98 | 110,145.84 Da | 30.90 | 102.74 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 65 | 4.2E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 127 | 177 | 1.7E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 689 | 910 | 2.8E-42 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 360 | 592 | 3.06E-46 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 680 | 967 | 4.86E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 49 | 310 | 1.96E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 181 | 2.7E-45 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 283 | 384 | 5.1E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 385 | 615 | 7.8E-55 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 775 | 980 | 4.8E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 654 | 774 | 1.2E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 182 | 282 | 2.1E-29 | IPR032675 |
| SMART | SM00220 | serkin_6 | 687 | 967 | 1.1E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 92 | 115 | 97.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 286 | 310 | 67.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 501 | 525 | 66.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 549 | 572 | 400.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 213 | 237 | 37.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 140 | 163 | 30.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 687 | 970 | 36.117329 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 819 | 831 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 693 | 716 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_015066471.1 | receptor-like protein kinase HSL1 [Solanum pennellii] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology