Basic Information
Locus ID:
gene-LOC107011365
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
WRKY transcription factor 3
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 54654274 | 54657113 | - | gene-LOC107011365 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.68 | 51,198.26 Da | 56.92 | 56.76 | -0.78 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 387 | 444 | 1.0E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 218 | 273 | 9.9E-22 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 215 | 275 | 2.35E-23 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 378 | 446 | 1.31E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 370 | 447 | 3.9E-35 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 204 | 276 | 2.0E-25 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 386 | 445 | 3.9E-39 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 216 | 274 | 1.6E-32 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 381 | 446 | 35.645424 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 218 | 275 | 22.653006 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 181 | 204 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G03340.1 | WRKY DNA-binding protein 3. Encodes WRKY DNA-binding protein 3 (WRKY3). | 0 |
| RefSeq | XP_015066320.1 | probable WRKY transcription factor 3 [Solanum pennellii] | 0 |
| Q9ZQ70 | Probable WRKY transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=WRKY3 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology