Basic Information
Locus ID:
gene-LOC107011211
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 48513346 | 48521530 | + | gene-LOC107011211 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.30 | 58,634.17 Da | 45.88 | 88.58 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 44 | 363 | 1.5E-73 | IPR000490 |
| Pfam | PF07983 | X8 domain | 381 | 452 | 3.1E-20 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 44 | 363 | 1.82E-77 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 374 | 492 | 1.3E-11 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 43 | 370 | 9.8E-105 | - |
| SMART | SM00768 | X8_cls | 380 | 465 | 1.1E-48 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 278 | 291 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11820.2 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_015066104.1 | glucan endo-1,3-beta-glucosidase 1 isoform X1 [Solanum pennellii] | 0 |
| O65399 | Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology