Basic Information
Locus ID:
gene-LOC107010950
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 47028608 | 47035676 | + | gene-LOC107010950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.18 | 81,310.35 Da | 47.72 | 97.21 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 119 | 178 | 1.2E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 476 | 741 | 4.6E-39 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 452 | 741 | 6.09E-65 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 237 | 6.8E-35 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 445 | 549 | 1.3E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 255 | 7.8E-41 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 551 | 744 | 5.9E-46 | - |
| SMART | SM00369 | LRR_typ_2 | 189 | 211 | 5.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 141 | 164 | 5.3 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 473 | 745 | 32.315285 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 119 | 141 | 7.157505 | IPR001611 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 328 | 349 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 328 | 357 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G20850.1 | STRUBBELIG-receptor family 1. | 0 |
| RefSeq | XP_015065702.1 | protein STRUBBELIG-RECEPTOR FAMILY 3-like isoform X1 [Solanum pennellii] | 0 |
| Q06BH3 | Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana OX=3702 GN=SRF1 PE=1 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology