Basic Information
Locus ID:
gene-LOC107010896
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 30352577 | 30363104 | - | gene-LOC107010896 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.28 | 144,740.69 Da | 46.86 | 72.66 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 1041 | 1298 | 5.21613E-111 | - |
| CDD | cd06410 | PB1_UP2 | 193 | 288 | 1.26979E-45 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1036 | 1298 | 5.8E-62 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 206 | 289 | 4.5E-17 | IPR000270 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1025 | 1297 | 6.65E-78 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 205 | 293 | 8.24E-20 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1028 | 1122 | 1.7E-25 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 208 | 289 | 1.7E-8 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1123 | 1311 | 1.2E-53 | - |
| SMART | SM00220 | serkin_6 | 1035 | 1302 | 3.9E-56 | IPR000719 |
| SMART | SM00666 | PB1_new | 204 | 288 | 2.1E-26 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1035 | 1301 | 41.106632 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1160 | 1172 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1041 | 1066 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1225 | 1247 | 1.1E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1117 | 1130 | 1.1E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1154 | 1172 | 1.1E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1269 | 1291 | 1.1E-12 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35050.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_015065641.1 | uncharacterized protein LOC107010896 [Solanum pennellii] | 0 |
| O64768 | RAF-like serine/threonine-protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=RAF24 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology