Basic Information
Locus ID:
gene-LOC107010761
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 55870373 | 55872674 | + | gene-LOC107010761 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.85 | 69,171.46 Da | 45.40 | 93.34 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 187 | 231 | 1.21883E-4 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 342 | 607 | 9.1E-34 | IPR001245 |
| Pfam | PF01476 | LysM domain | 191 | 232 | 2.4E-4 | IPR018392 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 324 | 608 | 5.48E-57 | IPR011009 |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 174 | 246 | 3.6E-8 | IPR036779 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 301 | 403 | 1.9E-13 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 404 | 616 | 2.2E-48 | - |
| SMART | SM00257 | LysM_2 | 188 | 232 | 0.0028 | IPR018392 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 187 | 231 | 11.276593 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 313 | 608 | 29.347143 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23770.1 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein. | 0 |
| RefSeq | XP_015065530.1 | protein LYK5-like [Solanum pennellii] | 0 |
| O64825 | LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology