Basic Information
Locus ID:
gene-LOC107010092
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
PAN-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 47766149 | 47767984 | + | gene-LOC107010092 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 44,493.66 Da | 41.00 | 96.99 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 98 | 364 | 1.8295E-99 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 94 | 359 | 2.3E-46 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 69 | 363 | 4.05E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 52 | 167 | 4.7E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 168 | 376 | 4.2E-58 | - |
| SMART | SM00220 | serkin_6 | 92 | 362 | 2.3E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 92 | 379 | 36.498947 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 98 | 121 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 213 | 225 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11460.2 | - | 0 |
| RefSeq | XP_015064842.1 | cysteine-rich receptor-like protein kinase 24 [Solanum pennellii] | 0 |
| Q8GYA4 | Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 1 | Ftri5G28475 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132621388 |
| Solanaceae | Solanum chilense | 1 | SOLCI002696000 |
| Solanaceae | Solanum pennellii | 5 | gene-LOC107010092, gene-LOC107010094, gene-LOC107016926 ... |