Basic Information
Locus ID:
gene-LOC107009573
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 41092397 | 41096514 | + | gene-LOC107009573 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 73,919.50 Da | 39.26 | 87.81 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 316 | 518 | 3.8E-47 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 144 | 230 | 2.0E-9 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 36 | 124 | 2.7E-12 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 295 | 585 | 4.59E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 135 | 232 | 9.6E-12 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 275 | 391 | 5.9E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 392 | 593 | 4.6E-56 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 24 | 126 | 1.0E-16 | IPR038408 |
| SMART | SM00220 | serkin_6 | 316 | 585 | 4.5E-36 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 25 | 126 | 15.728474 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 131 | 234 | 12.524031 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 316 | 601 | 38.675583 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 437 | 449 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 322 | 344 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28670.1 | Protein kinase family protein with domain of unknown function (DUF26). | 0 |
| RefSeq | XP_015064400.1 | putative cysteine-rich receptor-like protein kinase 43 isoform X1 [Solanum pennellii] | 0 |
| Q9M0G5 | Cysteine-rich receptor-like protein kinase 46 OS=Arabidopsis thaliana OX=3702 GN=CRK46 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology