Basic Information
Locus ID:
gene-LOC107008952
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 2433469 | 2438444 | + | gene-LOC107008952 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.21 | 71,567.87 Da | 32.95 | 88.59 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 325 | 597 | 8.47488E-88 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 47 | 126 | 2.4E-10 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 144 | 235 | 4.2E-12 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 320 | 529 | 1.3E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 305 | 614 | 1.15E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 395 | 605 | 3.3E-59 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 138 | 238 | 1.9E-17 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 279 | 394 | 7.4E-32 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 31 | 128 | 5.3E-13 | IPR038408 |
| SMART | SM00220 | serkin_6 | 319 | 610 | 1.8E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 319 | 610 | 39.071335 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 133 | 238 | 15.384494 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 27 | 128 | 14.044784 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 440 | 452 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 325 | 347 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70520.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_015063666.1 | cysteine-rich receptor-like protein kinase 2 [Solanum pennellii] | 0 |
| Q9CAL3 | Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRK2 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology