Basic Information
Locus ID:
gene-LOC107008764
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Cysteine-rich receptor-like protein kinase 42
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 53362591 | 53366511 | - | gene-LOC107008764 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.55 | 73,215.67 Da | 28.12 | 91.11 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 328 | 591 | 9.13677E-92 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 72 | 133 | 1.2E-9 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 326 | 590 | 2.9E-44 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 162 | 242 | 2.6E-12 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 304 | 607 | 5.13E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 42 | 135 | 2.9E-13 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 281 | 397 | 1.3E-30 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 146 | 244 | 1.1E-14 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 398 | 596 | 7.8E-61 | - |
| SMART | SM00220 | serkin_6 | 322 | 590 | 6.7E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 322 | 606 | 36.442413 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 144 | 244 | 15.094827 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 34 | 135 | 13.936158 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 443 | 455 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 328 | 350 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 639 | 655 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 639 | 668 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40380.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 42. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_015063409.1 | cysteine-rich receptor-like protein kinase 42 [Solanum pennellii] | 0 |
| Q9FNE1 | Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana OX=3702 GN=CRK42 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology