Basic Information
Locus ID:
gene-LOC107008196
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 95132740 | 95136120 | + | gene-LOC107008196 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.12 | 75,559.68 Da | 38.28 | 97.75 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 419 | 679 | 2.29908E-95 | - |
| Pfam | PF13855 | Leucine rich repeat | 151 | 210 | 3.7E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 38 | 75 | 3.2E-7 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 417 | 678 | 4.5E-38 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 392 | 678 | 9.24E-57 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 245 | 1.02E-42 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 149 | 260 | 2.5E-31 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 492 | 685 | 5.6E-42 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 389 | 491 | 2.3E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 147 | 1.4E-29 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 413 | 683 | 29.61569 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 306 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 306 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45340.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_015062610.1 | BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 [Solanum pennellii] | 0 |
| Q9SX31 | Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana OX=3702 GN=PERK9 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology