Basic Information
Locus ID:
gene-LOC107008136
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Glucan endo-1,3-beta-glucosidase 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 727743 | 733825 | + | gene-LOC107008136 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.86 | 54,161.50 Da | 43.72 | 87.25 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 28 | 347 | 1.4E-78 | IPR000490 |
| Pfam | PF07983 | X8 domain | 363 | 434 | 2.4E-19 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 28 | 348 | 6.0E-80 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 357 | 454 | 3.5E-10 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 27 | 356 | 1.2E-111 | - |
| SMART | SM00768 | X8_cls | 362 | 447 | 5.1E-47 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_015062545.1 | glucan endo-1,3-beta-glucosidase 4 [Solanum pennellii] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology