Basic Information
Locus ID:
gene-LOC107008121
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 96597031 | 96600714 | + | gene-LOC107008121 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.13 | 55,903.23 Da | 34.14 | 90.80 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 172 | 438 | 1.63621E-100 | - |
| Pfam | PF00069 | Protein kinase domain | 168 | 435 | 1.2E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 143 | 438 | 3.37E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 145 | 241 | 2.2E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 242 | 451 | 5.6E-62 | - |
| SMART | SM00220 | serkin_6 | 166 | 443 | 2.2E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 166 | 443 | 37.813408 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 172 | 194 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 288 | 300 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 118 | 138 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 452 | 469 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 483 | 501 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 452 | 501 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 121 | 138 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G01540.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_015062526.1 | probable serine/threonine-protein kinase At1g01540 [Solanum pennellii] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology