Basic Information
Locus ID:
gene-LOC107008116
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 88581557 | 88586264 | + | gene-LOC107008116 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.39 | 59,794.11 Da | 52.00 | 48.96 | -1.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04438 | HIT zinc finger | 499 | 530 | 5.8E-7 | IPR007529 |
| Pfam | PF04795 | PAPA-1-like conserved region | 398 | 483 | 1.2E-19 | IPR006880 |
| SMART | SM01406 | PAPA_1_2 | 398 | 483 | 1.8E-30 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 389 | 456 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 95 | 128 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 324 | 345 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 314 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 456 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 346 | 375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 145 | 159 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 166 | 185 | - | - |
| Coils | Coil | Coil | 436 | 463 | - | - |
| Coils | Coil | Coil | 394 | 424 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47350.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_015062519.1 | soluble guanylate cyclase gcy-33 [Solanum pennellii] | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology