Basic Information
Locus ID:
gene-LOC107007729
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Phragmoplast orienting kinesin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 106666426 | 106682314 | - | gene-LOC107007729 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.11 | 334,808.81 Da | 50.23 | 88.82 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 238 | 569 | 3.4E-108 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 232 | 602 | 3.13E-118 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 228 | 581 | 1.5E-134 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 230 | 577 | 1.6E-161 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 232 | 569 | 121.225494 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 465 | 476 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 304 | 325 | 3.7E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 466 | 484 | 3.7E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 433 | 450 | 3.7E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 519 | 540 | 3.7E-40 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 94 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2561 | 2586 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 137 | 182 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2567 | 2586 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 59 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2911 | 2942 | - | - |
| Coils | Coil | Coil | 972 | 1027 | - | - |
| Coils | Coil | Coil | 2712 | 2767 | - | - |
| Coils | Coil | Coil | 576 | 603 | - | - |
| Coils | Coil | Coil | 2412 | 2516 | - | - |
| Coils | Coil | Coil | 1356 | 1383 | - | - |
| Coils | Coil | Coil | 2363 | 2390 | - | - |
| Coils | Coil | Coil | 1219 | 1253 | - | - |
| Coils | Coil | Coil | 2873 | 2907 | - | - |
| Coils | Coil | Coil | 2049 | 2076 | - | - |
| Coils | Coil | Coil | 2535 | 2562 | - | - |
| Coils | Coil | Coil | 2777 | 2797 | - | - |
| Coils | Coil | Coil | 1976 | 1996 | - | - |
| Coils | Coil | Coil | 671 | 698 | - | - |
| Coils | Coil | Coil | 2182 | 2216 | - | - |
| Coils | Coil | Coil | 2258 | 2285 | - | - |
| Coils | Coil | Coil | 1941 | 1961 | - | - |
| Coils | Coil | Coil | 1099 | 1154 | - | - |
| Coils | Coil | Coil | 1640 | 1667 | - | - |
| Coils | Coil | Coil | 838 | 872 | - | - |
| Coils | Coil | Coil | 2830 | 2850 | - | - |
| Coils | Coil | Coil | 1895 | 1915 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19050.1 | phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_015061958.1 | kinesin-like protein KIN-12D isoform X1 [Solanum pennellii] | 0 |
| Q27IK6 | Kinesin-like protein KIN-12D OS=Arabidopsis thaliana OX=3702 GN=KIN12D PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology