Basic Information
Locus ID:
gene-LOC107007675
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 2130614 | 2134176 | + | gene-LOC107007675 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.99 | 111,867.83 Da | 39.28 | 98.06 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 684 | 961 | 6.5E-46 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 567 | 588 | 1.5 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 62 | 9.9E-6 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 27 | 277 | 3.74E-42 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 669 | 964 | 2.16E-73 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 221 | 589 | 4.94E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 279 | 369 | 3.7E-25 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 762 | 991 | 6.9E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 370 | 622 | 3.2E-59 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 663 | 761 | 1.2E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 177 | 278 | 3.1E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 176 | 7.9E-33 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 567 | 593 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 542 | 566 | 27.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 233 | 257 | 0.43 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 160 | 184 | 180.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 682 | 964 | 2.4E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 328 | 352 | 400.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 682 | 964 | 35.665043 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 235 | 257 | 7.119001 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 816 | 828 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 688 | 711 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_015061860.1 | receptor-like protein kinase 5 [Solanum pennellii] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology