Basic Information
Locus ID:
gene-LOC107007498
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 106768341 | 106779985 | - | gene-LOC107007498 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 101,805.32 Da | 36.33 | 84.67 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 593 | 866 | 1.38326E-94 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 63 | 8.5E-4 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 588 | 861 | 5.7E-48 | IPR000719 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 391 | 435 | 1.3E-6 | IPR025875 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 327 | 365 | 9.1E-7 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 566 | 873 | 1.43E-79 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 436 | 3.47E-47 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 665 | 883 | 1.1E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 551 | 664 | 3.7E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 326 | 2.4E-80 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 328 | 452 | 5.5E-33 | IPR032675 |
| SMART | SM00220 | serkin_6 | 587 | 867 | 1.1E-44 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 587 | 866 | 40.074848 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 593 | 615 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 712 | 724 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 452 | 475 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 914 | 939 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_015061628.1 | receptor protein kinase TMK1-like isoform X1 [Solanum pennellii] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology