Basic Information
Locus ID:
gene-LOC107007379
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Universal stress protein family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 80937859 | 80944063 | - | gene-LOC107007379 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.05 | 75,903.95 Da | 41.47 | 80.88 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 10 | 148 | 2.93093E-48 | - |
| CDD | cd14066 | STKc_IRAK | 412 | 672 | 3.12985E-85 | - |
| Pfam | PF00582 | Universal stress protein family | 10 | 121 | 6.8E-11 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 407 | 660 | 3.3E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 385 | 665 | 8.23E-70 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 10 | 145 | 3.18E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 479 | 675 | 2.9E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 372 | 478 | 2.0E-26 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 9 | 147 | 1.4E-10 | IPR014729 |
| SMART | SM00220 | serkin_6 | 406 | 670 | 2.1E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 406 | 669 | 36.47068 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 524 | 536 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 154 | 210 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 154 | 196 | - | - |
| Coils | Coil | Coil | 332 | 378 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12000.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_027769358.1 | U-box domain-containing protein 35-like isoform X1 [Solanum pennellii] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology