Basic Information
Locus ID:
gene-LOC107007364
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 99377086 | 99381598 | - | gene-LOC107007364 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.93 | 55,009.06 Da | 42.06 | 75.81 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 168 | 425 | 3.0E-43 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 145 | 427 | 4.05E-74 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 242 | 456 | 3.8E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 125 | 239 | 2.0E-27 | - |
| SMART | SM00220 | serkin_6 | 165 | 430 | 3.9E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 165 | 442 | 35.382362 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 284 | 296 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 171 | 193 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 73 | 98 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 98 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05140.2 | - | 0 |
| RefSeq | XP_015061448.1 | receptor-like cytosolic serine/threonine-protein kinase RBK2 [Solanum pennellii] | 0 |
| Q8RXC8 | Receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Arabidopsis thaliana OX=3702 GN=RBK2 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology