Basic Information
Locus ID:
gene-LOC107006677
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 80429983 | 80435192 | + | gene-LOC107006677 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 64,364.89 Da | 53.34 | 92.83 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 307 | 550 | 2.78203E-135 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 303 | 550 | 6.0E-70 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 293 | 549 | 3.33E-81 | IPR011009 |
| SUPERFAMILY | SSF55021 | ACT-like | 174 | 248 | 1.46E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 380 | 569 | 1.2E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 287 | 379 | 1.0E-26 | - |
| SMART | SM00220 | serkin_6 | 301 | 554 | 4.1E-62 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 301 | 550 | 44.484657 | IPR000719 |
| ProSiteProfiles | PS51671 | ACT domain profile. | 177 | 251 | 14.891636 | IPR002912 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 418 | 430 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 458 | 468 | 1.5E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 412 | 430 | 1.5E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 477 | 499 | 1.5E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 521 | 543 | 1.5E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 375 | 388 | 1.5E-17 | IPR001245 |
| Coils | Coil | Coil | 28 | 48 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38470.1 | ACT-like protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_015060680.1 | serine/threonine-protein kinase STY46-like isoform X1 [Solanum pennellii] | 0 |
| F4JTP5 | Serine/threonine-protein kinase STY46 OS=Arabidopsis thaliana OX=3702 GN=STY46 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology