Basic Information
Locus ID:
gene-LOC107006670
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 81397652 | 81399900 | + | gene-LOC107006670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.77 | 66,437.78 Da | 30.00 | 100.80 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 70 | 4.3E-4 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 316 | 562 | 5.4E-26 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 287 | 563 | 6.46E-52 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 24 | 194 | 2.79E-28 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 216 | 4.2E-39 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 272 | 384 | 1.6E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 385 | 577 | 5.9E-32 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 310 | 574 | 24.10343 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G48380.1 | BAK1-interacting receptor-like kinase 1. Encodes a BAK1-interacting receptor-like kinase named BIR1. Negatively regulates multiple plant resistance signaling pathways, one of which is the SOBIR1(AT2G31880)-dependent pathway. | 0 |
| RefSeq | XP_015060673.1 | probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Solanum pennellii] | 0 |
| Q9ASS4 | Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana OX=3702 GN=At5g48380 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 2 | gene-LOC132601924, gene-LOC132602035 |
| Solanaceae | Solanum chilense | 1 | SOLCI004988400 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107006670, gene-LOC107025476 |