Basic Information
Locus ID:
gene-LOC107006577
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
C-terminus of AA_permease
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 81195951 | 81204180 | - | gene-LOC107006577 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.20 | 66,008.55 Da | 32.36 | 109.90 | 0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13520 | Amino acid permease | 78 | 460 | 4.4E-45 | IPR002293 |
| Pfam | PF13906 | C-terminus of AA_permease | 517 | 567 | 1.7E-17 | IPR029485 |
| Gene3D | G3DSA:1.20.1740.10 | Amino acid/polyamine transporter I | 72 | 508 | 3.9E-95 | - |
| PIRSF | PIRSF006060 | AA_transporter | 451 | 588 | 0.25 | - |
| PIRSF | PIRSF006060 | AA_transporter | 55 | 516 | 4.7E-72 | - |
| Coils | Coil | Coil | 56 | 76 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21120.1 | amino acid transporter 1. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. | 0 |
| RefSeq | XP_015060581.1 | cationic amino acid transporter 1-like [Solanum pennellii] | 0 |
| Q84MA5 | Cationic amino acid transporter 1 OS=Arabidopsis thaliana OX=3702 GN=CAT1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology