Basic Information
Locus ID:
gene-LOC107006540
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 65937231 | 65955703 | - | gene-LOC107006540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.10 | 252,164.27 Da | 49.84 | 82.37 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 162 | 493 | 4.2E-110 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 156 | 523 | 1.21E-118 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 149 | 520 | 3.9E-137 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 154 | 501 | 4.3E-167 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 156 | 493 | 122.974365 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 389 | 400 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 357 | 374 | 1.4E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 443 | 464 | 1.4E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 390 | 408 | 1.4E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 228 | 249 | 1.4E-40 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 66 | 94 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 40 | - | - |
| Coils | Coil | Coil | 1820 | 1882 | - | - |
| Coils | Coil | Coil | 2067 | 2108 | - | - |
| Coils | Coil | Coil | 2006 | 2026 | - | - |
| Coils | Coil | Coil | 1936 | 1963 | - | - |
| Coils | Coil | Coil | 1602 | 1622 | - | - |
| Coils | Coil | Coil | 2137 | 2164 | - | - |
| Coils | Coil | Coil | 695 | 718 | - | - |
| Coils | Coil | Coil | 1133 | 1153 | - | - |
| Coils | Coil | Coil | 1712 | 1753 | - | - |
| Coils | Coil | Coil | 807 | 841 | - | - |
| Coils | Coil | Coil | 582 | 629 | - | - |
| Coils | Coil | Coil | 1911 | 1934 | - | - |
| Coils | Coil | Coil | 870 | 890 | - | - |
| Coils | Coil | Coil | 1656 | 1690 | - | - |
| Coils | Coil | Coil | 1435 | 1455 | - | - |
| Coils | Coil | Coil | 500 | 520 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17360.3 | - | 0 |
| RefSeq | XP_015060554.1 | kinesin-like protein KIN-12C isoform X1 [Solanum pennellii] | 0 |
| Q27IK7 | Kinesin-like protein KIN-12C OS=Arabidopsis thaliana OX=3702 GN=KIN12C PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology