Basic Information
Locus ID:
gene-LOC107006232
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 89958060 | 89961842 | + | gene-LOC107006232 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.16 | 54,152.87 Da | 46.53 | 86.43 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 189 | 451 | 2.1E-41 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 166 | 451 | 5.06E-71 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 160 | 259 | 2.3E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 263 | 466 | 3.0E-58 | - |
| SMART | SM00220 | serkin_6 | 186 | 458 | 1.7E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 186 | 452 | 33.813488 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 192 | 214 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 305 | 317 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 78 | 104 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 104 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18910.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_015060328.1 | receptor-like cytosolic serine/threonine-protein kinase RBK2 [Solanum pennellii] | 0 |
| Q8RXC8 | Receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Arabidopsis thaliana OX=3702 GN=RBK2 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology