Basic Information
Locus ID:
gene-LOC107006205
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Translocase of chloroplast 159
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 88051698 | 88056170 | - | gene-LOC107006205 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.56 | 148,897.61 Da | 43.22 | 83.59 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 1080 | 1342 | 1.5E-122 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 715 | 873 | 5.8E-20 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 708 | 874 | 4.32E-20 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 690 | 948 | 2.8E-54 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 626 | 1351 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 712 | 947 | 27.026712 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 359 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 361 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 605 | 628 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 381 | 402 | - | - |
| Coils | Coil | Coil | 1040 | 1067 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02510.1 | translocon at the outer envelope membrane of chloroplasts 159. An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly. | 0 |
| RefSeq | XP_015060304.1 | translocase of chloroplast 159, chloroplastic [Solanum pennellii] | 0 |
| O81283 | Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC159 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology