Basic Information
Locus ID:
gene-LOC107006083
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Inositol polyphosphate phosphatase, catalytic domain homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 10363945 | 10371168 | - | gene-LOC107006083 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.76 | 126,925.99 Da | 43.70 | 74.40 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09074 | INPP5c | 582 | 928 | 6.73571E-111 | - |
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 587 | 919 | 8.0E-16 | IPR005135 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 221 | 567 | 1.14E-23 | IPR036322 |
| SUPERFAMILY | SSF56219 | DNase I-like | 559 | 951 | 3.17E-60 | IPR036691 |
| Gene3D | G3DSA:2.130.10.10 | - | 322 | 560 | 3.5E-6 | IPR015943 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 561 | 960 | 1.5E-103 | IPR036691 |
| Gene3D | G3DSA:2.130.10.10 | - | 127 | 321 | 2.1E-9 | IPR015943 |
| SMART | SM00128 | i5p_5 | 580 | 934 | 2.1E-86 | IPR000300 |
| SMART | SM00320 | WD40_4 | 211 | 249 | 2.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 438 | 476 | 440.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 478 | 515 | 26.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 259 | 297 | 0.27 | IPR001680 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 958 | 1109 | 9.707193 | IPR000535 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 385 | 420 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 385 | 400 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 401 | 417 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1104 | 1144 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1124 | 1138 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1048 | 1067 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43900.1 | Endonuclease/exonuclease/phosphatase family protein. | 0 |
| RefSeq | XP_015060217.1 | type I inositol polyphosphate 5-phosphatase 12-like isoform X1 [Solanum pennellii] | 0 |
| O80560 | Type I inositol polyphosphate 5-phosphatase 12 OS=Arabidopsis thaliana OX=3702 GN=IP5P12 PE=1 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology