Basic Information
Locus ID:
gene-LOC107005957
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 4973266 | 4983510 | - | gene-LOC107005957 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 48,448.96 Da | 42.76 | 110.80 | 0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 90 | 246 | 6.0E-21 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 280 | 420 | 2.1E-19 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 118 | 264 | 1.5E-15 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 265 | 424 | 1.0E-17 | IPR044880 |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 74 | 423 | 4.2E-96 | IPR004798 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 58 | 423 | 4.8E-114 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_027769231.1 | vacuolar cation/proton exchanger 3-like isoform X1 [Solanum pennellii] | 0 |
| Q8L783 | Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana OX=3702 GN=CAX5 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology