Basic Information
Locus ID:
gene-LOC107005773
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Inositol polyphosphate phosphatase, catalytic domain homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 81361374 | 81370591 | + | gene-LOC107005773 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.75 | 127,610.13 Da | 46.93 | 76.07 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09074 | INPP5c | 546 | 892 | 2.71901E-108 | - |
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 551 | 883 | 3.0E-13 | IPR005135 |
| SUPERFAMILY | SSF56219 | DNase I-like | 523 | 916 | 6.33E-61 | IPR036691 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 182 | 531 | 1.92E-20 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 117 | 357 | 1.2E-9 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 386 | 543 | 3.9E-6 | IPR015943 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 544 | 903 | 1.7E-97 | IPR036691 |
| SMART | SM00128 | i5p_5 | 544 | 898 | 2.9E-93 | IPR000300 |
| SMART | SM00320 | WD40_4 | 438 | 479 | 64.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 174 | 209 | 7.4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 219 | 257 | 2.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 481 | 518 | 49.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 399 | 436 | 72.0 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1093 | 1152 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1075 | 1152 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43900.1 | Endonuclease/exonuclease/phosphatase family protein. | 0 |
| RefSeq | XP_015059917.1 | type I inositol polyphosphate 5-phosphatase 12-like [Solanum pennellii] | 0 |
| O80560 | Type I inositol polyphosphate 5-phosphatase 12 OS=Arabidopsis thaliana OX=3702 GN=IP5P12 PE=1 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology