Basic Information
Locus ID:
gene-LOC107005501
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
casein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 938042 | 946616 | + | gene-LOC107005501 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.60 | 77,320.82 Da | 45.57 | 71.27 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14016 | STKc_CK1 | 128 | 403 | 1.02004E-127 | - |
| Pfam | PF00069 | Protein kinase domain | 128 | 415 | 2.9E-18 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 128 | 405 | 2.32E-57 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 98 | 448 | 5.6E-80 | - |
| SMART | SM00220 | serkin_6 | 128 | 425 | 2.8E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 128 | 413 | 23.849018 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 134 | 166 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 254 | 266 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 73 | 95 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 98 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 72 | - | - |
| Coils | Coil | Coil | 43 | 91 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13670.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_015059597.1 | casein kinase 1-like protein HD16 [Solanum pennellii] | 0 |
| Q852L0 | Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology