Basic Information
Locus ID:
gene-LOC107005428
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 77842784 | 77847633 | - | gene-LOC107005428 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 62,199.95 Da | 39.74 | 82.63 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 150 | 226 | 3.07373E-14 | - |
| Pfam | PF00651 | BTB/POZ domain | 150 | 239 | 5.4E-15 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 266 | 358 | 1.1E-9 | IPR011705 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 441 | 553 | 4.64E-7 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 151 | 240 | 1.18E-13 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 132 | 242 | 4.3E-17 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 258 | 372 | 6.1E-14 | - |
| SMART | SM00875 | BACK_2 | 258 | 360 | 1.6E-8 | IPR011705 |
| SMART | SM00225 | BTB_4 | 143 | 243 | 8.3E-10 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 135 | 212 | 13.446345 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 79 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 57 | 79 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_015059508.1 | BTB/POZ domain-containing protein POB1-like isoform X1 [Solanum pennellii] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology