Basic Information
Locus ID:
gene-LOC107005030
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Short Name:
SERK5
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 103922882 | 103931136 | + | gene-LOC107005030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.32 | 68,199.14 Da | 38.81 | 97.02 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 294 | 565 | 7.2E-45 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 69 | 1.2E-10 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 27 | 207 | 2.38E-40 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 272 | 568 | 6.56E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 370 | 587 | 1.1E-69 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 262 | 369 | 1.6E-41 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 208 | 1.3E-57 | IPR032675 |
| SMART | SM00220 | serkin_6 | 293 | 567 | 1.0E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 293 | 580 | 36.258671 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 416 | 428 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 299 | 321 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33430.1 | BRI1-associated receptor kinase. Leu-rich receptor Serine/threonine protein kinase. Component of BR signaling that interacts with BRI1 in vitro and in vivo to form a heterodimer. Brassinolide-dependent association of BRI1 and BAK1 in vivo. Phosphorylation of both BRI1 and BAK1 on Thr residues was BR dependent. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. | 0 |
| RefSeq | XP_015058975.1 | BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like [Solanum pennellii] | 0 |
| Q94F62 | BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=BAK1 PE=1 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology