Basic Information
Locus ID:
gene-LOC107004980
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 3896857 | 3904582 | - | gene-LOC107004980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.99 | 56,025.91 Da | 48.71 | 87.02 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 192 | 451 | 9.9E-40 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 166 | 457 | 9.16E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 162 | 267 | 6.3E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 268 | 471 | 3.6E-56 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 190 | 462 | 32.541428 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 196 | 219 | - | IPR017441 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 311 | 323 | - | IPR008266 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 111 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 51 | 97 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 49 | - | - |
| Coils | Coil | Coil | 141 | 161 | - | - |
| Coils | Coil | Coil | 11 | 31 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65530.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_015058904.1 | receptor-like cytosolic serine/threonine-protein kinase RBK1 [Solanum pennellii] | 0 |
| Q8H1D6 | Receptor-like cytosolic serine/threonine-protein kinase RBK1 OS=Arabidopsis thaliana OX=3702 GN=RBK1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology