Basic Information
Locus ID:
gene-LOC107004820
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1D
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 8189540 | 8207284 | + | gene-LOC107004820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.36 | 185,424.28 Da | 45.85 | 77.40 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 202 | 454 | 4.26991E-97 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1337 | 1598 | 2.20669E-131 | IPR044769 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1545 | 1596 | 4.9E-8 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 199 | 451 | 1.4E-26 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1376 | 1542 | 1.4E-34 | IPR002498 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 253 | 421 | 1.07E-26 | IPR027409 |
| SUPERFAMILY | SSF54849 | GroEL-intermediate domain like | 205 | 445 | 7.02E-8 | IPR027410 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1311 | 1598 | 1.31E-77 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1292 | 1457 | 6.7E-33 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1459 | 1599 | 9.7E-41 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 252 | 421 | 4.5E-35 | IPR027409 |
| SMART | SM00330 | PIPK_2 | 1300 | 1599 | 4.3E-87 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1278 | 1598 | 54.61298 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1128 | 1148 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 74 | 88 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1633 | 1647 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1625 | 1661 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 74 | 105 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 89 | 105 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34260.1 | FORMS APLOID AND BINUCLEATE CELLS 1A. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_015058673.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D [Solanum pennellii] | 0 |
| Q9XID0 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D OS=Arabidopsis thaliana OX=3702 GN=FAB1D PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology