Basic Information
Locus ID:
gene-LOC107004528
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Receptor protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 902876 | 907611 | - | gene-LOC107004528 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 101,927.79 Da | 33.37 | 91.00 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 589 | 862 | 1.77275E-93 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 61 | 6.6E-6 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 584 | 857 | 6.4E-45 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 324 | 359 | 0.0025 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 59 | 434 | 3.74E-47 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 571 | 874 | 1.17E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 544 | 660 | 1.5E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 322 | 446 | 1.6E-34 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 661 | 876 | 4.5E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 320 | 1.3E-81 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 86 | 108 | 290.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 583 | 863 | 2.4E-42 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 109 | 132 | 0.011 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 408 | 430 | 65.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 184 | 207 | 200.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 583 | 863 | 39.947643 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 708 | 720 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 589 | 611 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 448 | 471 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 443 | 471 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_015058228.1 | receptor protein kinase TMK1 [Solanum pennellii] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology