Basic Information
Locus ID:
gene-LOC107003998
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 58879348 | 58881141 | - | gene-LOC107003998 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.66 | 45,364.18 Da | 53.84 | 56.21 | -0.97 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03004 | Plant transposase (Ptta/En/Spm family) | 134 | 273 | 9.1E-18 | IPR004252 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 157 | 184 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 348 | 396 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 179 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
| Coils | Coil | Coil | 299 | 319 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_015057710.2 | uncharacterized protein LOC107003998 [Solanum pennellii] | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 1 | Sgl36013 |
| Solanaceae | Lycium barbarum | 35 | gene-LOC132601393, gene-LOC132607984, gene-LOC132608722 ... |
| Solanaceae | Solanum chilense | 11 | SOLCI000202400, SOLCI000775100, SOLCI001269100 ... |
| Solanaceae | Solanum pennellii | 18 | gene-LOC107001376, gene-LOC107003998, gene-LOC107006315 ... |