Basic Information
Locus ID:
gene-LOC107003550
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 1106511 | 1108709 | + | gene-LOC107003550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.49 | 38,357.41 Da | 30.77 | 96.51 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 147 | 207 | 5.4E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 81 | 117 | 1.3E-10 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 254 | 324 | 1.8E-7 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 78 | 284 | 4.37E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 244 | 330 | 5.4E-12 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 79 | 194 | 2.2E-29 | IPR032675 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G39390.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_015057374.1 | putative receptor-like protein kinase At3g47110 [Solanum pennellii] | 0 |
| C0LGP4 | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana OX=3702 GN=At3g47570 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Oryza coarctata | 1 | Oco12G014970 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107003550 |