Basic Information
Locus ID:
gene-LOC107003547
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 538326 | 540322 | + | gene-LOC107003547 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.61 | 64,202.29 Da | 40.51 | 104.59 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 6 | 45 | 6.3E-7 | IPR001810 |
| SUPERFAMILY | SSF52058 | L domain-like | 132 | 416 | 7.48E-9 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 7 | 50 | 7.59E-10 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 126 | 370 | 4.5E-9 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 5 | 46 | 1.9E-6 | - |
| SMART | SM00256 | fbox_2 | 8 | 48 | 0.0019 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02910.2 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_015057371.2 | F-box/FBD/LRR-repeat protein At5g56420-like [Solanum pennellii] | 0 |
| Q9LYZ4 | F-box/LRR-repeat protein At5g02910 OS=Arabidopsis thaliana OX=3702 GN=At5g02910 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology