Basic Information
Locus ID:
gene-LOC107002973
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 60929985 | 60935699 | - | gene-LOC107002973 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 59,654.50 Da | 37.01 | 80.28 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 433 | 495 | 5.5735E-19 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 55 | 313 | 1.37629E-140 | - |
| Pfam | PF00069 | Protein kinase domain | 59 | 314 | 5.0E-77 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 432 | 495 | 2.2E-16 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 362 | 420 | 1.1E-7 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 343 | 520 | 1.01E-44 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 53 | 324 | 1.31E-87 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 59 | 141 | 1.7E-29 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 323 | 497 | 2.3E-51 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 142 | 322 | 2.7E-59 | - |
| SMART | SM00054 | efh_1 | 397 | 425 | 1.2 | IPR002048 |
| SMART | SM00220 | serkin_6 | 56 | 314 | 9.9E-102 | IPR000719 |
| SMART | SM00054 | efh_1 | 469 | 497 | 4.7E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 361 | 389 | 0.042 | IPR002048 |
| SMART | SM00054 | efh_1 | 433 | 461 | 5.4E-4 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 393 | 428 | 8.292731 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 357 | 392 | 12.281773 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 429 | 464 | 13.648647 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 465 | 500 | 14.457615 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 56 | 314 | 49.318485 | IPR000719 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 478 | 490 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 406 | 418 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 62 | 85 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 176 | 188 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 442 | 454 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12480.1 | calmodulin-domain protein kinase 7. calmodulin-domain protein kinase CDPK isoform 7 (CPK7) | 0 |
| RefSeq | XP_004250931.1 | calcium-dependent protein kinase 7 [Solanum lycopersicum] | 0 |
| Q38873 | Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana OX=3702 GN=CPK7 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology