Basic Information
Locus ID:
gene-LOC107002875
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 101022449 | 101027130 | - | gene-LOC107002875 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.10 | 61,888.39 Da | 49.03 | 58.76 | -0.91 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04438 | HIT zinc finger | 526 | 557 | 3.0E-6 | IPR007529 |
| Pfam | PF04795 | PAPA-1-like conserved region | 425 | 510 | 1.6E-20 | IPR006880 |
| SMART | SM01406 | PAPA_1_2 | 425 | 510 | 1.2E-30 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 106 | 123 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 165 | 192 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 74 | 123 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 425 | 479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 425 | 484 | - | - |
| Coils | Coil | Coil | 414 | 451 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56460.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_015056557.1 | uncharacterized protein LOC107002875 [Solanum pennellii] | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology