Basic Information
Locus ID:
gene-LOC107002641
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Kelch motif
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 78721979 | 78723377 | + | gene-LOC107002641 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 38,248.86 Da | 50.66 | 67.41 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 157 | 203 | 5.5E-13 | IPR006652 |
| Pfam | PF12937 | F-box-like | 11 | 53 | 1.5E-5 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 114 | 155 | 1.4E-8 | IPR006652 |
| SUPERFAMILY | SSF81383 | F-box domain | 10 | 57 | 1.96E-8 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 82 | 271 | 7.06E-40 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 47 | 301 | 1.1E-38 | IPR015915 |
| Gene3D | G3DSA:1.20.1280.50 | - | 12 | 46 | 1.7E-5 | - |
| SMART | SM00612 | kelc_smart | 120 | 168 | 1.0E-7 | IPR006652 |
| SMART | SM00612 | kelc_smart | 169 | 216 | 8.7E-6 | IPR006652 |
| SMART | SM00256 | fbox_2 | 13 | 53 | 1.2E-4 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G15670.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_015056227.1 | F-box/kelch-repeat protein At1g15670-like [Solanum pennellii] | 0 |
| Q9LMR5 | F-box/kelch-repeat protein At1g15670 OS=Arabidopsis thaliana OX=3702 GN=At1g15670 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology