Basic Information
Locus ID:
gene-LOC107002594
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
BTB POZ domain-containing protein POB1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 4238059 | 4243933 | - | gene-LOC107002594 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 67,015.52 Da | 49.23 | 78.12 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 196 | 262 | 8.89233E-11 | - |
| Pfam | PF00651 | BTB/POZ domain | 193 | 277 | 4.4E-13 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 302 | 394 | 3.2E-11 | IPR011705 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 478 | 589 | 6.41E-6 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 192 | 277 | 1.18E-11 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 171 | 311 | 2.5E-16 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 312 | 417 | 2.1E-15 | - |
| SMART | SM00875 | BACK_2 | 294 | 396 | 6.5E-10 | IPR011705 |
| SMART | SM00225 | BTB_4 | 179 | 279 | 1.4E-4 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 179 | 248 | 12.949977 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_027768237.1 | BTB/POZ domain-containing protein POB1-like isoform X1 [Solanum pennellii] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology