Basic Information
Locus ID:
gene-LOC107002564
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Cytidylyltransferase-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 74840059 | 74859589 | + | gene-LOC107002564 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.26 | 45,474.23 Da | 38.90 | 86.83 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02174 | CCT | 46 | 188 | 1.58873E-80 | IPR041723 |
| CDD | cd02173 | ECT | 245 | 396 | 8.49642E-81 | - |
| Pfam | PF01467 | Cytidylyltransferase-like | 51 | 179 | 9.1E-26 | IPR004821 |
| Pfam | PF01467 | Cytidylyltransferase-like | 250 | 357 | 5.4E-13 | IPR004821 |
| SUPERFAMILY | SSF52374 | Nucleotidylyl transferase | 49 | 182 | 3.26E-28 | - |
| SUPERFAMILY | SSF52374 | Nucleotidylyl transferase | 247 | 382 | 9.92E-23 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 39 | 213 | 1.0E-54 | IPR014729 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 218 | 410 | 2.1E-51 | IPR014729 |
| TIGRFAM | TIGR00125 | cyt_tran_rel: cytidyltransferase-like domain | 248 | 315 | 8.9E-16 | IPR004821 |
| TIGRFAM | TIGR00125 | cyt_tran_rel: cytidyltransferase-like domain | 49 | 114 | 3.5E-19 | IPR004821 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 220 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38670.1 | phosphorylethanolamine cytidylyltransferase 1. Encodes a mitochondrial ethanolamine-phosphate cytidylyltransferase, involved in phosphatidylethanolamine (PE) biosynthesis. | 0 |
| RefSeq | XP_015056113.1 | ethanolamine-phosphate cytidylyltransferase [Solanum pennellii] | 0 |
| Q9ZVI9 | Ethanolamine-phosphate cytidylyltransferase OS=Arabidopsis thaliana OX=3702 GN=PECT1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology